Summary of Funded Projects FY 08

FY RFA/PA Number Actv IC PI Name(s) All Institution Project Title
2008 PAR06-410 R01 EY KOULAKOV, ALEXEI COLD SPRING HARBOR LABORATORY Quantitiative model for the development of neural topographic maps
2008 PAR06-410 R01 CA LEE, PETER POON-HANG STANFORD UNIVERSITY Interplay Between Cancer and Immune Cells on Targeted Therapy
2008 PAR08-010 R01 EB SOHER, BRIAN J DUKE UNIVERSITY MrSPA: Integrated tools and development platform for magnetic resonance research
2008 PAR07-161 R41 CA SHEKHAR, RAJ IGI TECHNOLOGIES, INC. Development of a low-cost hardware accelerator for 3D image registration
2008 PAR07-161 R43 GM FARID, RAMY SCHRODINGER, INC. Commercial Software for Modeling of G Protein-Coupled Receptors
2008 PAR06-411 R21 GM AGARWAL, PRATUL K UT-BATTELLE, LLC-OAK RIDGE NATIONAL LAB Accelerating Biomolecular Simulations on Reconfigurable Computing Hardware
2008 PAR06-411 R21 GM ALBECK, AMNON BAR-ILAN UNIVERSITY Enzyme Isoselective Inhibition ? a Novel Computational Approach to Drug Design
2008 PAR06-411 R21 GM BERN, MARSHALL WAYNE PALO ALTO RESEARCH CENTER Algorithms and Software for Difficult Proteomics Problems
2008 PAR06-411 R21 GM BUCHANAN, JACK W UNIVERSITY OF TENNESSEE HEALTH SCI CTR Grid Based Modeling of Electrical Propagation in Excitable Tissue
2008 PAR06-411 R21 LM KIM, SEUNGCHAN ARIZONA STATE UNIVERSITY-TEMPE CAMPUS Integrating Genomic Data and Biological Knowledge to Learn Context-Specific Gene
2008 PAR06-411 R21 GM LILL, MARKUS A PURDUE UNIVERSITY WEST LAFAYETTE Dynamic Scoring: A novel method for quantitative modeling of guest-host associati
2008 PAR06-411 R21 HL MUELLER, MARTINA MEDICAL UNIVERSITY OF SOUTH CAROLINA Decision Support in the Care of Preterm Newborns-Tool Development
2008 PAR06-411 R21 GM QIU, XING UNIVERSITY OF ROCHESTER Correlation Vectors in Gene Expression Profiling
2008 PAR06-411 R21 CA RESSOM, HABTOM W GEORGETOWN UNIVERSITY Peptide Biomarker Discovery by Mass Spectrometry for Early Detection of Liver Can
2008 PAR06-411 R21 GM SUN, NING YALE UNIVERSITY Statistical Methods to Study Dynamic Transcriptional Regulatory Networks
2008 PAR06-411 R21 GM VAVYLONIS, DIMITRIOS LEHIGH UNIVERSITY Computational Analysis and Modeling of Contractile Ring Assembly
2008 PAR06-411 R21 CA WU, HUANMEI INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS Lung Tumor Motion Behavior Analysis Using 4DCT
2008 PAR06-411 R21 GM YING, HAO WAYNE STATE UNIVERSITY Distributed, Collaborative Intelligent Agents for Proactive Post-Marketing Drug S
2008 PAR06-411 R21 AA ZHAO, ZHONGMING VIRGINIA COMMONWEALTH UNIVERSITY Generation of Ethanol Response Gene Resource by Large-Scale Data Integration
2008 PAR06-411 R21 AG ZHOU, XIANGHONG JASMINE UNIVERSITY OF SOUTHERN CALIFORNIA A web platform for integrative genomic analysis in aging
2008 PAR07-344 R01 GM BAR-JOSEPH, ZIV CARNEGIE-MELLON UNIVERSITY Reconstructing dynamic regulatory networks
2008 PAR07-344 R01 AI BORNEMAN, JAMES UNIVERSITY OF CALIFORNIA RIVERSIDE Identifying Microorganisms involved in Human Health and Disease Processes
2008 PAR07-344 R01 GM COHEN, WILLIAM W CARNEGIE-MELLON UNIVERSITY Adaptive Personalized Information Management for Biologists
2008 PAR07-344 R01 DA GEE, JAMES C UNIVERSITY OF PENNSYLVANIA Advanced Neuroimages Registration Methods: Effects of Prenatal Cocaine Exposure
2008 PAR07-344 R01 EB GENTLEMAN, ROBERT C FRED HUTCHINSON CANCER RESEARCH CENTER The Statistical and Computational Analysis of Flow Cytometry Data
2008 PAR07-344 R01 HL KASSAB, GHASSAN S INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS A Validated Micro-Structural Mechanical Model of Coronary Arteries
2008 PAR07-344 R01 GM PONOMARENKO, JULIA VLADIMIROVNA UNIVERSITY OF CALIFORNIA SAN DIEGO Transcription Factor-DNA Interactions: Structural Classification and Prediction
2008 PAR07-344 R01 GM SALI, ANDREJ UNIVERSITY OF CALIFORNIA SAN FRANCISCO IMP: Software for Hybrid Determination of Macromolecular Assembly Structures
2008 PAR07-344 R01 GM SCHACHTER, ASHER D CHILDREN'S HOSPITAL BOSTON Preclinical predictive markers of post-approval drug safety
2008 PAR07-344 R01 EB SRINIVASAN, SUBHADRA DARTMOUTH COLLEGE A Boundary Element Method for MRI/NIR Tomography and Image-guided Fluorescence
2008 PAR07-344 R01 GM SU, ANDREW I NOVARTIS INST FOR FUNCTIONAL GENOMICS BioGPS: Extensible Web 2.0 gene portal for structured and unstructured annotation
2008 PAR07-344 R01 GM TIAN, BIN UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL Analysis of mRNA Polyadenylation across Species and Tissues
2008 PAR07-344 R01 GM WANG, PEI FRED HUTCHINSON CANCER RESEARCH CENTER Statistical Methods for Integrative Analysis of Genomics and Proteomics Data
2008 PAR07-344 R01 GM WEISS, JEFFREY A. UNIVERSITY OF UTAH FEBio - Finite Elements for Biomechanics and Biophysics
2008 PAR07-344 R01 AI WIMBERLY, MICHAEL C SOUTH DAKOTA STATE UNIVERSITY An Intregated System for the Epidemiological Application of Earth Observation Tec
2008 PAR07-344 R01 CA WONG, STEPHEN TC METHODIST HOSPITAL RESEARCH INSTITUTE High-content Image Analysis and Modeling for RANigenome-wide Screening
2008 PAR07-344 R01 EB YENER, BULENT RENSSELAER POLYTECHNIC INSTITUTE A Computational Approach To Closing The Gap Between Tissue Structure And Function
2008 PAR07-160 R43 RR GENG, JASON XIGEN, LLC GI Video-to-3D: Gastrointestinal Tract 3D Modeling and Visualization for In-Vivo
2008 PAR07-160 R44 GM GONG, LIXIN INSIGHTFUL CORPORATION Scalable Learning with Ensemble Techniques and Parallel Computing
2008 PAR07-160 R43 GM HUGHES, OWEN EON CORPORATION Advanced image processing software for membrane protein structure determination
2008 PAR07-160 R44 MH LINDSTROM, WILLIAM MAXWELL ACELOT, INC. Scalable tools for the analysis of chemical compounds using graph-based querying
2008 PAR07-160 R43 HG NILSSON, ERIK J INSILICOS Scalable Secure Sharable Computation Platform for Proteomics Data Analysis
2008 PAR07-160 R44 CA SASINOWSKI, MACIEK INCOGEN, INC. Visual Programming Tool for Integrated Gene/Protein Networks in Cancer Research
2008 PAR07-160 R43 NS SMITH, MICHAEL E CORTECHS LABS, INC. Automated 4D Neuromorphometry: Detecting Change in Brain Structur
2008 PAR07-160 R43 GM STEWART, JAMES J STEWART COMPUTATIONAL CHEMISTRY Computer modeling of Biochemical Reaction Rates
2008 PAR07-160 R43 GM ULRICH, LUKE E. AGILE GENOMICS, LLC Integrating microbial signal transduction pathways and their metabolic targets
2008 PAR07-160 R43 HL VYSHEDSKIY, ANDREY STETHOGRAPHICS, INC. Improving the Differential Diagnosis of Pneumonia and Congestive Heart Failure Us
2008 PAR07-160 R43 LM ZHU, YUERONG BIOINFORX, INC. Development of a Highly Automated Microarray Data Analysis System That Allows
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